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BioCoder: A Benchmark for Bioinformatics Code Generation with Contextual Pragmatic Knowledge

Research paper by Xiangru Tang and collaborators. Published 2023-08-31. Topics: pre-trained language models, bioinformatics, code generation, domain knowledge, data operations.

Resource information

Authors
Xiangru Tang, Bill Qian, Rick Gao, Jiakang Chen, Xinyun Chen, Mark Gerstein
Research topics
pre-trained language models, bioinformatics, code generation, domain knowledge, data operations, functional dependencies, function-code generation, package dependencies, class declarations, global variables, fuzz-testing framework, InCoder
Publication date
2023-08-31
Publication
arXiv
Last record update
Nov 3, 2026