Agent skill
Glasser
Search, inspect, and run third-party data APIs through one CLI when the environment has no suitable integration.
ClaudeCodexCursorDevelopment & Engineering
adriansurething49,114
CC-BY-4.0View resource
Agent skills
Reusable instructions for compatible AI agents.
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Search resultsAgent skill
CZ CELLxGENE Census
Query CZ CELLxGENE Census (61M+ cells). Filter by cell type/tissue/disease, retrieve expression data, integrate with scanpy/PyTorch, for population-scale single-cell analysis.
OpenClawData & Analytics
Dicklesworthstone1,960
Agent skill
Pysam
Genomic file toolkit. Read/write SAM/BAM/CRAM alignments, VCF/BCF variants, FASTA/FASTQ sequences, extract regions, calculate coverage, for NGS data processing pipelines.
ClaudeCodexCursorData & Analytics
Dicklesworthstone1,960
Agent skill
Transcription Factor (TF) Regulatory Network Analysis
Use when analyzing transcription factor (TF) regulatory networks using Dorothea database. Input gene list, identify regulating transcription factors, generate TF-Target network visualization. For: transcription factor enrichment analysis, gene regulatory network research.
OpenClawData & Analytics
aipoch2,022
Agent skill
Transcriptome-Wide Association
Performs gene-level association from GWAS summary statistics via genetically predicted tissue expression using FUSION, PrediXcan, S-PrediXcan, S-MultiXcan, UTMOST, MOSTWAS, kTWAS, EpiXcan, TIGAR-V2, and probabilistic fine-mapping with FOCUS and MA-FOCUS. Use when running TWAS from GWAS sumstats, ...
ClaudeCodexOpenClawData & Analytics
GPTomics1,232
Agent skill
Effector Gene Prioritization
Maps GWAS-implicated loci to candidate effector (causal) genes by integrating variant-to-gene (V2G) features via Open Targets L2G (Mountjoy 2021), MAGMA gene-based association (de Leeuw 2015), FUMA SNP2GENE, cS2G combined SNP-to-gene scores (Gazal 2022), Polygenic Priority Scores (PoPS, Weeks 202...
ClaudeCodexOpenClawData & Analytics
GPTomics1,232
Agent skill
UniProt Access
Query UniProt's REST API (post-2022 endpoint at rest.uniprot.org) for protein sequences, annotations, GO terms, cross-references, ID mappings, and proteomes. Use when fetching UniProtKB entries, navigating the JSON schema, choosing between UniProtKB/UniRef/UniParc/Proteomes resources, deciding st...
CursorData & Analytics
GPTomics1,232
Agent skill
Trial Reporting Under CONSORT 2025 + ICH E9(R1)
Prepares statistical reports for clinical trials following CONSORT 2025, SPIRIT 2025, ICH E9(R1) estimands, and FDA 2023 covariate adjustment guidance. Covers Table 1 generation, analysis populations (ITT/FAS/PP/Safety), the 5 ICH E9(R1) intercurrent-event strategies, MMRM under MAR (mmrm), refer...
ClaudeCodexOpenClawData & Analytics
GPTomics1,232
Agent skill
Batch Downloads
Download large datasets from NCBI efficiently using EPost, history server, batching, rate limiting, and retry logic. Use when bulk-fetching tens of thousands of sequences, pulling all results of a large ESearch, designing reproducible pipelines, comparing E-utilities to NCBI Datasets v2 CLI, or i...
CursorData & Analytics
GPTomics1,232
Agent skill
Repeat and Transposable Element Annotation
Discovers, classifies, and masks repetitive elements and transposable elements with RepeatModeler2 (de novo family library), RepeatMasker (masking against a library), EDTA (plant/structural TEs), or EarlGrey (auto-curating wrapper), and quantifies TE expression from RNA-seq with TEtranscripts/SQu...
ClaudeCodexOpenClawData & Analytics
GPTomics1,232
Agent skill
sgRNA Design Guide: Three-Tiered Approach
Three-tiered sgRNA design guide using validated Addgene sequences, CRISPick pre-computed datasets, or de novo design rules for CRISPR experiments
ClaudeCodexOpenClawData & Analytics
jaechang-hits385
CC-BY-4.0View resource
Agent skill
Shotgun Metagenomics Profiler
Shotgun metagenomics profiling — taxonomy, resistome, and functional pathways
OpenClawData & Analytics
ClawBio1,173
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