GROMACS MD Executor
GROMACS molecular dynamics skill for nanoparticle-biomolecule interaction simulations
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GROMACS molecular dynamics skill for nanoparticle-biomolecule interaction simulations
GROMACS molecular dynamics skill specialized for biomolecular systems, protein simulations, and free energy calculations
Performs alchemical free-energy calculations including relative binding free energy (RBFE / FEP+) and absolute binding free energy (ABFE) via OpenFE, FEP+, GROMACS, AMBER pmemd, and OpenMM with explicit lambda window scheduling, soft-core potentials, REST2 enhanced sampling, MBAR/BAR analysis, an...
Molecular dynamics simulation setup, execution, and trajectory analysis
Computational physics methods, simulations, and research tools
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